
Protein design
Lizatović R, Assent M, Barendregt A, Dahlin J, Bille A, Satzinger K, Tupina D, Heck AJR, Wennmalm S, André I. A Protein-Based Encapsulation System with Calcium-Controlled Cargo Loading and Detachment. Angew Chem Int Ed Engl. 2018 Aug 27;57(35):11334-11338.
Lizatović R, Aurelius O, Stenstrom O, Drakenberg T, Akke M, Logan DT and André I. A De Novo Designed Coiled-Coil Peptide with a Reversible pH-Induced Oligomerization Switch. Structure 2016.
Norn CN and André I. Computational design of protein self-assembly. Current Opinion in Structural Biology 2016; pp 39-45.
Kaltofen S, Li C, Huang PS, Serpell LC, Barth A, André I. Computational de novo design of a self-assembling Peptide with predefined structure. Journal of molecular biology. 2015;427:550-62.
Rämisch S, Weiniger U, Martinsson J, Akke M and Andre I "Computational design of Leucine-Rich Repeat proteins with a defined geometry" Proc Natl Acad Sci, 2014, pii: 201413638.

Guiding structural modeling with experimental data

Evolution

Protein structure prediction
Rämisch S, Lizatović R, André I. Automated de novo phasing and model building of coiled-coil proteins. Acta Cryst D. 2015;D71.
Rämisch S, Lizatovic and Andre I. "Exploring alternate states and oligomerization preferences of coiled-coils by de novo structure modeling" Proteins, 2014. doi: 10.1002/prot.24729